Day 9, Homology modeling

By using SWISS-MODEL with the templates 1G42 and 1S8O, both with a sequence similarity around 20 %, the following model was obtained. The red structure is the modelled. As seen it is not very good looking, only a small part was successfully modeled. Since these two templat had the highest sequence similarity homology modeling might not be possible

Below is the amino acids, close to the N-terminal, we were able to model

 struktur.JPG

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